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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008866.1_3245_3324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3245 - 3324

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACAAAC

U12 Branch Point Sequence:

CACCCCACAAAC

Flanking Amino Acid:

LCRLGFAVLLVNYRGSLGFG

Intron Amino Acid Position:

498

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

48.9

-0

0.9

54.6

27.1

Major PPT

74.1

0.54

0.8

65.3

36.2

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

42.9

-0.5

1.8

47.97

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030550

Chromosome:

PEDO01008866.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029286

21 - 4377

4357