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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008866.1_3414_3491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3414 - 3491

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGGGGG

5'SS Class:

major

3'SS Sequence:

CCCACGCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GGGTGCTGACCG

Flanking Amino Acid:

VGEQDVADTQLAVEQALHSE

Intron Amino Acid Position:

528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.3

59.5

42.5

Major BPS

66.3

0.4

1.1

41.8

Major PPT

61.3

0.25

0.9

53.2

30.9

Minor 5ss

-3

3.2

29.6

43.2

Minor BPS

42.6

-0.7

2.1

45.67

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030550

Chromosome:

PEDO01008866.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029286

21 - 4377

4357