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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008866.1_7360_7520_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7360 - 7520

Intron Length:

161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCACCG

5'SS Class:

major

3'SS Sequence:

GGGGGTGGCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

GTGGCACTGACC

Flanking Amino Acid:

HWQATTPHDHRFLPSPRNGL

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.3

0.24

1.2

47.1

43.2

Major BPS

61.3

0.28

52.7

34.2

Major PPT

48.7

-0

1.1

44.4

Minor 5ss

31.3

-2.1

3.2

40.1

45.5

Minor BPS

45.1

-0.4

56.57

41.9

Associated Gene:

Gene:

MST1

Ensembl Gene ID:

ENSAPLG00000004404

Chromosome:

PEDO01008866.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028865

3240 - 8393

5154

ENSAPLT00000023491

3240 - 8393

5154

ENSAPLT00000021779

4406 - 8393

3988

ENSAPLT00000004530

4406 - 8393

3988