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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008892.1_1674_1749_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1674 - 1749

Intron Length:
76

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCG|GTGAGCACG

5'SS Class:
major

3'SS Sequence:
CCCCCCCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGACAC

U12 Branch Point Sequence:
CACCCGCTGACA

Flanking Amino Acid:
LLKAVVKETLRLYPVIPSNA

Intron Amino Acid Position:
517

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1
62.7
43.4

Major BPS
48.1
-0.1
1.2
56.1
39.6

Major PPT
66.9
0.38
0.7
57.1
27.1

Minor 5ss
34.7
-1.7
2.8
42
44.3

Minor BPS
41.7
-0.6
2.3
49.42
41.4

Associated Gene:

Gene:
CYP27B1

Ensembl Gene ID:

Chromosome:
PEDO01008892.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 4316
4296

21 - 4316
4296