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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008892.1_1917_2270_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1917 - 2270

Intron Length:
354

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTGAGGGCA

5'SS Class:
major

3'SS Sequence:
CACCCCCCCGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTTAC

U12 Branch Point Sequence:
CCCCCCTTACCC

Flanking Amino Acid:
TELLLAGVDTISSTLSWSLY

Intron Amino Acid Position:
462

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.7
0.61
1
63.1
37.1

Major BPS
56.6
0.16
1.1
48.9
36.2

Major PPT
65.2
0.34
0.8
57.7
26.4

Minor 5ss
24.5
-2.9
3.3
30.5
42.8

Minor BPS
54.4
0.12
1.7
59.26
46

Associated Gene:

Gene:
CYP27B1

Ensembl Gene ID:

Chromosome:
PEDO01008892.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 4316
4296

21 - 4316
4296