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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008971.1_10476_10856_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10476 - 10856

Intron Length:

381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

GGGCCCTCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

CTCTCTTTCTCC

Flanking Amino Acid:

ASLARERRSLDALAAAEPAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

72.2

39.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

0.27

0.9

54.1

36.5

Minor 5ss

30.4

-2.2

3.2

31.9

42.5

Minor BPS

40.9

-0.7

3.5

61.09

Associated Gene:

Gene:

PDGFB

Ensembl Gene ID:

ENSAPLG00000013976

Chromosome:

PEDO01008971.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018288

2365 - 13067

10703

ENSAPLT00000014584

2365 - 13071

10707