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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008971.1_12584_12901_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12584 - 12901

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGGATT

5'SS Class:

major

3'SS Sequence:

TCTGTTTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTGTAC

U12 Branch Point Sequence:

CCTCGCTGTACT

Flanking Amino Acid:

SSRPAPREQKRLSPSFTTAA

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.3

82.5

Major BPS

42.6

-0.4

1.4

Major PPT

78.8

0.65

76.3

37.7

Minor 5ss

39.6

-1.2

3.4

56.9

Minor BPS

44.5

-0.3

2.2

62.16

47.3

Associated Gene:

Gene:

PDGFB

Ensembl Gene ID:

ENSAPLG00000013976

Chromosome:

PEDO01008971.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014584

2365 - 13071

10707