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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008971.1_3274_8238_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3274 - 8238

Intron Length:

4965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TGTCATCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTTTGTCATCT

Flanking Amino Acid:

VLSLPLASLEGDPIPEDIYE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

74.8

38.1

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

70.2

0.46

65.7

40.6

Minor 5ss

34.2

-1.8

2.8

40.6

45.6

Minor BPS

48.8

-0

2.4

79.56

42.7

Associated Gene:

Gene:

PDGFB

Ensembl Gene ID:

ENSAPLG00000013976

Chromosome:

PEDO01008971.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018288

2365 - 13067

10703

ENSAPLT00000014584

2365 - 13071

10707