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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008971.1_8336_10391_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8336 - 10391

Intron Length:

2056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATCTC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGCTAC

U12 Branch Point Sequence:

CCGCTGCTACCA

Flanking Amino Acid:

LQRALRIDSVEEDSSSPDLN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

44.6

-0.3

1.3

39.5

40.5

Major PPT

85.8

0.8

0.7

80.2

Minor 5ss

38.1

-1.3

3.1

52.9

44.3

Minor BPS

35.3

-1.1

2.2

39.98

40.5

Associated Gene:

Gene:

PDGFB

Ensembl Gene ID:

ENSAPLG00000013976

Chromosome:

PEDO01008971.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018288

2365 - 13067

10703

ENSAPLT00000014584

2365 - 13071

10707