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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008977.1_946_1583_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

946 - 1583

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTTTT

5'SS Class:

major

3'SS Sequence:

GCTCCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGATAT

U12 Branch Point Sequence:

ATATCCTGACCT

Flanking Amino Acid:

DGTLRLWDLTTGTTTRRFVG

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.2

83.9

30.3

Major BPS

64.1

0.35

1.3

45.5

Major PPT

71.9

0.49

0.8

65.4

30.4

Minor 5ss

42.1

-0.9

57.4

40.7

Minor BPS

63.1

0.49

1.8

80.59

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002910

Chromosome:

PEDO01008977.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038428

16 - 1881

1866