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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008997.1_688_781_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

688 - 781

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACACAGG

5'SS Class:

weak_major

3'SS Sequence:

GCTCATCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAT

U12 Branch Point Sequence:

TGCCGCTCATCC

Flanking Amino Acid:

QFLPFLAIKANNLCWLGYGC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.1

50.8

45.9

Major BPS

67.4

0.43

1.2

38.9

Major PPT

73.4

0.53

0.9

65.8

35.6

Minor 5ss

38.8

-1.3

3.2

47.8

45.9

Minor BPS

42.9

-0.5

2.1

52.83

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029554

Chromosome:

PEDO01008997.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017859

52 - 998

947

ENSAPLT00000010084

12 - 998

987