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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01008998.1_3116_3449_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3116 - 3449

Intron Length:

334

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGT|GCCAGGGGG

5'SS Class:

weak_major

3'SS Sequence:

TGTCCTTTGTGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

TCTTCGATACCC

Flanking Amino Acid:

KSKGGKGEGLLPQERDPPPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.4

53.4

40.7

Major BPS

73.5

0.58

73.6

32.5

Major PPT

54.7

0.11

1.8

41.8

Minor 5ss

15.7

-4

3.8

37.4

Minor BPS

46.6

-0.2

2.5

66.99

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016827

Chromosome:

PEDO01008998.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024680

1357 - 3609

2253