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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009021.1_1827_3568_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1827 - 3568

Intron Length:

1742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTGAGGCGA

5'SS Class:

weak_major

3'SS Sequence:

TGTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGTAT

U12 Branch Point Sequence:

TCGTGCTAAGTT

Flanking Amino Acid:

GAAPRQNVSLPFKLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.9

0.16

1.3

47.9

44.1

Major BPS

56.4

0.16

1.6

57.4

49.1

Major PPT

90.7

0.92

0.7

88.9

28.1

Minor 5ss

26.5

-2.7

3.2

33.9

41.9

Minor BPS

44.9

-0.3

2.2

62.86

47.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016945

Chromosome:

PEDO01009021.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046201

1645 - 3584

1940