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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009094.1_440_577_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

440 - 577

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGCGC

5'SS Class:

major

3'SS Sequence:

CACGGGGTGGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCGCAC

U12 Branch Point Sequence:

ACGGGGTGGAAG

Flanking Amino Acid:

CSDPEAIHMMSAPVEGPCTD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

58.7

46.2

Major BPS

-0.5

1.4

42.8

41.8

Major PPT

45.1

-0.2

1.2

36.1

39.3

Minor 5ss

36.6

-1.5

3.3

45.6

Minor BPS

29.5

-1.7

2.2

25.52

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018928

Chromosome:

PEDO01009094.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041594

373 - 936

564