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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009129.1_5149_5347_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5149 - 5347

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCGG

5'SS Class:

major

3'SS Sequence:

CTGTGTCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAT

U12 Branch Point Sequence:

CATGCGGCACCC

Flanking Amino Acid:

ALRSQLSDQKLLSAEILHHR

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

59.7

46.7

Major BPS

49.9

-0

1.4

61.8

44.5

Major PPT

79.3

0.66

0.9

37.4

Minor 5ss

26.8

-2.7

2.9

31.8

42.6

Minor BPS

32.2

-1.3

2.6

42.81

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024688

Chromosome:

PEDO01009129.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041369

4434 - 9483

5050