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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009129.1_5898_6530_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5898 - 6530

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATGG

5'SS Class:

strong_major

3'SS Sequence:

GGCACCGCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GCTCCTGGCACC

Flanking Amino Acid:

SGQRVLQMVTGEEAQLAQEK

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.5

39.2

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

55.2

0.12

46.2

36.4

Minor 5ss

31.9

-2.1

38.5

46.6

Minor BPS

-0.8

2.3

48.91

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024688

Chromosome:

PEDO01009129.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041369

4434 - 9483

5050