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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009163.1_2463_3076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

2463 - 3076

Intron Length:

614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATGTAAC

5'SS Class:

major

3'SS Sequence:

TATTTCCCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TTCTCTTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

76.1

32.8

Major BPS

0.82

0.8

24.9

Major PPT

80.7

0.69

0.8

78.3

30.1

Minor 5ss

44.5

-0.6

2.5

58.4

39.6

Minor BPS

69.4

0.69

1.5

83.14

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023529

Chromosome:

PEDO01009163.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020330

2123 - 7359

5237