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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009163.1_4507_4937_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4507 - 4937

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCGTGTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCACAT

U12 Branch Point Sequence:

CTTCCTTTTACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.6

Major BPS

68.9

0.47

Major PPT

76.3

0.59

0.9

69.7

41.5

Minor 5ss

34.7

-1.7

2.9

44.4

43.1

Minor BPS

65.9

0.58

1.6

81.46

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023529

Chromosome:

PEDO01009163.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020330

2123 - 7359

5237