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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009163.1_5834_6468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5834 - 6468

Intron Length:

635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTGCCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCAATAACA

Flanking Amino Acid:

IRATGSYIAGTNGNSNGLVP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

72.2

39.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

71.8

0.49

65.5

Minor 5ss

30.4

-2.2

3.2

31.9

42.5

Minor BPS

69.3

0.6

1.9

86.12

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023529

Chromosome:

PEDO01009163.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020330

2123 - 7359

5237