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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009166.1_893_1236_F

Intron Information:

Intron Rank:

134475

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

893 - 1236

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

ATCAGTTGGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATCAA

U12 Branch Point Sequence:

AGGTGATCAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.8

38.5

Major BPS

63.9

0.34

1.2

40.9

Major PPT

58.1

0.18

1.2

53.7

45.2

Minor 5ss

35.1

-1.7

2.7

42.5

44.3

Minor BPS

-0.5

2.1

51.03

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022274

Chromosome:

PEDO01009166.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034632

21 - 2282

2262