Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009211.1_31555_31718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31555 - 31718

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

AGTCCCTGCACC

Flanking Amino Acid:

GTNAEVMPAQWEFQVGPCEG

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.2

33.8

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

85.7

0.8

0.7

80.9

24.3

Minor 5ss

43.2

-0.7

2.9

57.8

46.8

Minor BPS

50.2

-0

1.9

64.52

40.3

Associated Gene:

Gene:

GLUL

Ensembl Gene ID:

ENSAPLG00000021974

Chromosome:

PEDO01009211.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035564

10599 - 34339

23741

ENSAPLT00000038674

29341 - 34339

4999