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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009211.1_32897_33927_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
32897 - 33927

Intron Length:
1031

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGAGGT

5'SS Class:
strong_major

3'SS Sequence:
TTCTTCTCCCCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
GGCTCAC

U12 Branch Point Sequence:
CCTGGCTCACAG

Flanking Amino Acid:
TLDHEPKSLEDLPEWNFDGS

Intron Amino Acid Position:
138

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.5
0.86
0.8
75
35.2

Major BPS
52.1
0.05
1.3
57
41.8

Major PPT
83.9
0.76
0.7
77
31.7

Minor 5ss
26.7
-2.7
3.3
38.5
46.6

Minor BPS
35.9
-1.2
2.1
35.81
45.7

Associated Gene:

Gene:
GLUL

Ensembl Gene ID:

Chromosome:
PEDO01009211.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

29341 - 34339
4999

10599 - 34339
23741