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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009219.1_1989_2069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1989 - 2069

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CACCCCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TCATTGTCACCC

Flanking Amino Acid:

LFAGTAEWIARCQNWEGGIG

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

67.2

0.39

0.9

60.8

34.8

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

42.4

-0.6

2.3

54.44

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028703

Chromosome:

PEDO01009219.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034454

458 - 2819

2362

ENSAPLT00000027999

458 - 6143

5686

ENSAPLT00000025527

458 - 3092

2635