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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009219.1_496_623_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

496 - 623

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTCCC

5'SS Class:

major

3'SS Sequence:

GCCTGCCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCGAC

U12 Branch Point Sequence:

GGCGCTGCGACG

Flanking Amino Acid:

DAYKTNHHAAQLVLQREKHF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.1

63.8

40.9

Major BPS

44.6

-0.3

1.3

39.2

40.8

Major PPT

72.9

0.51

0.9

36.3

Minor 5ss

37.7

-1.4

2.9

51.8

38.4

Minor BPS

36.9

-1.1

2.1

35.52

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028703

Chromosome:

PEDO01009219.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034454

458 - 2819

2362

ENSAPLT00000027999

458 - 6143

5686

ENSAPLT00000025527

458 - 3092

2635