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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009234.1_16879_19408_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16879 - 19408

Intron Length:

2530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

CCCGTCCTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAA

U12 Branch Point Sequence:

CGACCCTAAACC

Flanking Amino Acid:

SSLRGSQVSHSSLEMTCYDS

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

66.5

39.1

Major BPS

60.4

0.26

1.1

61.5

32.5

Major PPT

70.8

0.47

0.8

63.6

31.5

Minor 5ss

26.6

-2.7

3.1

33.5

41.9

Minor BPS

55.3

0.15

1.8

61.6

43.2

Associated Gene:

Gene:

NAV1

Ensembl Gene ID:

ENSAPLG00000023628

Chromosome:

PEDO01009234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032221

58 - 22627

22570