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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009234.1_2849_3349_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2849 - 3349

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCAC

5'SS Class:

major

3'SS Sequence:

TCGCTGGCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

CTCTCCCCACTC

Flanking Amino Acid:

ALNGTEVAPKELRIKRQNSS

Intron Amino Acid Position:

783

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.9

42.4

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

63.1

0.3

53.4

41.5

Minor 5ss

29.7

-2.3

3.5

40.5

Minor BPS

43.8

-0.4

2.1

54.71

43.9

Associated Gene:

Gene:

NAV1

Ensembl Gene ID:

ENSAPLG00000023628

Chromosome:

PEDO01009234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030141

286 - 11213

10928

ENSAPLT00000032221

58 - 22627

22570