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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009234.1_547_675_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

547 - 675

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

GGTTCTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

AGCTGCTCACCC

Flanking Amino Acid:

QLRETMHNMQLEVDLLKAEN

Intron Amino Acid Position:

944

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

71.8

33.2

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

71.8

0.49

0.9

62.4

39.8

Minor 5ss

24.1

-3

3.2

29.7

43.3

Minor BPS

-0.4

2.1

53.52

44.1

Associated Gene:

Gene:

NAV1

Ensembl Gene ID:

ENSAPLG00000023628

Chromosome:

PEDO01009234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032221

58 - 22627

22570

ENSAPLT00000030141

286 - 11213

10928