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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009234.1_5766_5893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5766 - 5893

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAAGG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

GCCACCTCACCG

Flanking Amino Acid:

DRNTLPKKGLRYQLHSQEEA

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

63.6

0.34

65.3

32.1

Major PPT

75.9

0.58

0.8

66.2

35.8

Minor 5ss

32.2

-2

40.4

45.3

Minor BPS

44.7

-0.5

1.9

44.88

46.8

Associated Gene:

Gene:

NAV1

Ensembl Gene ID:

ENSAPLG00000023628

Chromosome:

PEDO01009234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032221

58 - 22627

22570

ENSAPLT00000030141

286 - 11213

10928