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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009234.1_5936_6131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5936 - 6131

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

GGTGGCTGATCT

Flanking Amino Acid:

SGSPRLAHLDSSNRDRNTLP

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

71.4

37.4

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

0.72

0.7

31.9

Minor 5ss

30.8

-2.2

3.8

47.7

Minor BPS

-0.3

2.2

62.38

Associated Gene:

Gene:

NAV1

Ensembl Gene ID:

ENSAPLG00000023628

Chromosome:

PEDO01009234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032221

58 - 22627

22570

ENSAPLT00000030141

286 - 11213

10928