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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009234.1_6588_6699_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6588 - 6699

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

CCATCCTCATCC

Flanking Amino Acid:

KVAELPPTPLRAAAKTYVKP

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

81.3

0.7

73.7

31.3

Minor 5ss

41.3

-1

2.9

58.1

46.1

Minor BPS

49.9

-0

1.9

59.27

45.6

Associated Gene:

Gene:

NAV1

Ensembl Gene ID:

ENSAPLG00000023628

Chromosome:

PEDO01009234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032221

58 - 22627

22570

ENSAPLT00000030141

286 - 11213

10928