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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009234.1_7394_7662_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7394 - 7662

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCCG

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTGCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

GGGCTGCTAACC

Flanking Amino Acid:

HTAQSTLKVAGKPETKATDK

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

63.1

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

0.45

0.8

63.6

31.4

Minor 5ss

25.6

-2.8

30.2

Minor BPS

41.8

-0.6

2.2

49.79

40.1

Associated Gene:

Gene:

NAV1

Ensembl Gene ID:

ENSAPLG00000023628

Chromosome:

PEDO01009234.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032221

58 - 22627

22570

ENSAPLT00000030141

286 - 11213

10928