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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009236.1_995_3873_R

Intron Information:

Intron Rank:

144143

Intron Class:

major

Intron Phase:

Intron Coordinates:

995 - 3873

Intron Length:

2879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTGAA

5'SS Class:

major

3'SS Sequence:

TCATTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CATCTCTCATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.2

69.7

36.7

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

85.7

0.8

80.8

30.9

Minor 5ss

-2.6

3.1

31.6

42.8

Minor BPS

-0.1

1.8

62.34

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024810

Chromosome:

PEDO01009236.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048027

27 - 4869

4843