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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009249.1_4996_5509_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4996 - 5509

Intron Length:
514

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTGAGTAGC

5'SS Class:
major

3'SS Sequence:
TCTCTCTCAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCTGCAT

U12 Branch Point Sequence:
TCTCTCTCAACA

Flanking Amino Acid:
NMQIELVEAHKINDREQKLH

Intron Amino Acid Position:
1351

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72
0.52
1
66.3
39.5

Major BPS
50.1
0
1.4
63
43.2

Major PPT
77.6
0.62
0.8
73.5
30.1

Minor 5ss
32.8
-2
2.7
42.4
38.3

Minor BPS
64.3
0.45
1.5
72.76
39.1

Associated Gene:

Gene:
ARHGAP35

Ensembl Gene ID:

Chromosome:
PEDO01009249.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1793 - 15272
13480