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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009291.1_1651_2136_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1651 - 2136

Intron Length:
486

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGATTT

5'SS Class:
strong_major

3'SS Sequence:
TATTCTCTTCAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTTAT

U12 Branch Point Sequence:
TTTGTGTTAGCT

Flanking Amino Acid:
SIASLHKHNLVQHVVSQNCD

Intron Amino Acid Position:
184

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.4
0.86
0.9
83.3
29.1

Major BPS
78.7
0.71
1.2
71.7
44.6

Major PPT
74.4
0.55
1
72.3
37.7

Minor 5ss
44
-0.6
3.2
62.3
43.4

Minor BPS
50.5
0.09
2.3
78.99
43.6

Associated Gene:

Gene:
SIRT7

Ensembl Gene ID:

Chromosome:
PEDO01009291.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 3994
3974