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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009305.1_1076_1489_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1076 - 1489

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTATCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

AGTATATTATCT

Flanking Amino Acid:

TVTAAFAYPFRLNTVVFSEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

90.4

20.6

Major BPS

75.9

0.64

66.1

40.5

Major PPT

0.76

0.8

77.6

36.5

Minor 5ss

33.2

-1.9

3.4

48.7

47.5

Minor BPS

48.9

-0

1.9

69.11

41.2

Associated Gene:

Gene:

SYPL1

Ensembl Gene ID:

ENSAPLG00000025094

Chromosome:

PEDO01009305.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023203

470 - 2400

1931