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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009310.1_3006_3095_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

3006 - 3095

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

GGCTCCCACCCAG|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

CGTTCAA

U12 Branch Point Sequence:

TCAACCAGAACC

Flanking Amino Acid:

GDSGGGMYTVNLHKALASLA

Intron Amino Acid Position:

506

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.2

56.4

43.4

Major BPS

63.3

0.33

1.2

39.8

Major PPT

60.8

0.24

50.8

38.4

Minor 5ss

97.5

1.6

0.6

95.7

13.5

Minor BPS

49.7

-0

1.8

62.45

42.1

Associated Gene:

Gene:

POLR3C

Ensembl Gene ID:

ENSAPLG00000023392

Chromosome:

PEDO01009310.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030340

21 - 3581

3561

ENSAPLT00000022831

21 - 3581

3561