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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009310.1_3157_3231_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3157 - 3231

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAACA

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

CCCCGCTGAGTT

Flanking Amino Acid:

TATLESIVEERFGSRCARIF

Intron Amino Acid Position:

526

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.8

31.6

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

66.9

0.38

0.7

57.1

27.1

Minor 5ss

33.1

-1.9

2.9

41.4

44.7

Minor BPS

40.3

-0.6

1.9

49.5

44.5

Associated Gene:

Gene:

POLR3C

Ensembl Gene ID:

ENSAPLG00000023392

Chromosome:

PEDO01009310.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030340

21 - 3581

3561

ENSAPLT00000022831

21 - 3581

3561