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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009310.1_857_1174_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

857 - 1174

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCCC

5'SS Class:

major

3'SS Sequence:

CCCCCGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAC

U12 Branch Point Sequence:

CCCCGATTAACC

Flanking Amino Acid:

VGDTGLSLEQVKKALCVLLQ

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

64.9

37.8

Major BPS

64.1

0.35

1.2

67.6

36.5

Major PPT

64.5

0.33

59.7

35.5

Minor 5ss

30.6

-2.2

3.5

42.1

44.9

Minor BPS

45.9

-0.3

52.51

44.9

Associated Gene:

Gene:

POLR3C

Ensembl Gene ID:

ENSAPLG00000023392

Chromosome:

PEDO01009310.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030340

21 - 3581

3561

ENSAPLT00000022831

21 - 3581

3561