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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009311.1_8082_11563_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

8082 - 11563

Intron Length:

3482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTCCCCTTC

5'SS Class:

weak_minor

3'SS Sequence:

TGTGCTCCCGCAG|G

3'SS Class:

minor_hybrid

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

TGTCCCTGTGCT

Flanking Amino Acid:

GCSPLCHPRHDEFHPFIEAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

46.5

-0.2

1.4

48.1

43.6

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

72.6

0.51

0.9

66.1

35.8

Minor 5ss

52.6

0.09

2.8

38.2

Minor BPS

39.8

-0.6

3.6

71.66

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030171

Chromosome:

PEDO01009311.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026163

7980 - 12286

4307