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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009322.1_2406_2582_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2406 - 2582

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CTGCCCCTGATG

Flanking Amino Acid:

WRRCLLPHNRVKVTLDPRTA

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

80.2

0.68

0.8

73.8

31.3

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

-0.3

1.8

52.5

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026260

Chromosome:

PEDO01009322.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033810

1326 - 6425

5100