Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009325.1_23769_24021_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23769 - 24021

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

CCGCTCTGAGCG

Flanking Amino Acid:

EATELDINGRNGLMVACCKG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

76.7

0.6

0.8

30.9

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

43.4

-0.6

1.7

40.85

43.5

Associated Gene:

Gene:

ANKRD33

Ensembl Gene ID:

ENSAPLG00000030913

Chromosome:

PEDO01009325.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022589

23371 - 26661

3291