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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009325.1_44731_44907_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
44731 - 44907

Intron Length:
177

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGATCT

5'SS Class:
strong_major

3'SS Sequence:
GTTTCTTGCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GACTGAT

U12 Branch Point Sequence:
TGTTTCTTGCCT

Flanking Amino Acid:
NIPNWWQSYEALRVMGKMMR

Intron Amino Acid Position:
413

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
92.3
1
0.8
84.2
27.2

Major BPS
65.8
0.39
1.2
57.3
41.7

Major PPT
71.8
0.49
0.9
65.6
41

Minor 5ss
40.6
-1.1
3.1
57.4
46.8

Minor BPS
48.7
-0
3.5
83.36
37.8

Associated Gene:

Gene:
ACVR1B

Ensembl Gene ID:

Chromosome:
PEDO01009325.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

38422 - 46033
7612

39130 - 46092
6963