Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009325.1_44924_45003_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44924 - 45003

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

AACCCTCTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAGAA

U12 Branch Point Sequence:

TCCGCATTAAGA

Flanking Amino Acid:

WQSYEALRVMAQCPGRCENL

Intron Amino Acid Position:

418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

68.7

39.1

Major BPS

58.2

0.21

1.1

55.4

40.4

Major PPT

68.5

0.42

0.9

34.2

Minor 5ss

36.9

-1.5

39.1

46.1

Minor BPS

48.8

-0.1

59.69

46.2

Associated Gene:

Gene:

ACVR1B

Ensembl Gene ID:

ENSAPLG00000010616

Chromosome:

PEDO01009325.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019554

39130 - 46092

6963