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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009325.1_61013_61292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61013 - 61292

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCGCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

CCAGGCTGAGCT

Flanking Amino Acid:

TCEGCKGFFKRTVQKNAKYI

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

67.9

0.4

0.8

29.2

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

41.2

-0.5

2.1

53.09

47.7

Associated Gene:

Gene:

NR4A1

Ensembl Gene ID:

ENSAPLG00000029349

Chromosome:

PEDO01009325.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037480

59540 - 62977

3438