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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009325.1_61423_61522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61423 - 61522

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCAGGG

5'SS Class:

major

3'SS Sequence:

CTGCTGCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCACAT

U12 Branch Point Sequence:

CATTGCACATCC

Flanking Amino Acid:

KCLAVGMVKEVVRTDSLKGR

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.36

1.2

51.9

45.4

Major BPS

62.5

0.31

1.2

38.9

Major PPT

72.7

0.51

0.9

65.6

36.1

Minor 5ss

34.3

-1.8

3.5

47.6

47.8

Minor BPS

40.2

-0.7

2.3

52.73

44.4

Associated Gene:

Gene:

NR4A1

Ensembl Gene ID:

ENSAPLG00000029349

Chromosome:

PEDO01009325.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037480

59540 - 62977

3438