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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009325.1_61675_61770_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61675 - 61770

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCCG

5'SS Class:

major

3'SS Sequence:

CCCGTCCTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TGATCCTCACCA

Flanking Amino Acid:

PSATKLDYSKFQEAAPCQFE

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

57.9

46.7

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

65.6

0.35

60.7

35.2

Minor 5ss

29.7

-2.3

3.4

38.8

46.5

Minor BPS

57.4

0.23

1.9

69.69

42.1

Associated Gene:

Gene:

NR4A1

Ensembl Gene ID:

ENSAPLG00000029349

Chromosome:

PEDO01009325.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037480

59540 - 62977

3438