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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009325.1_61974_62051_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61974 - 62051

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCCAC

5'SS Class:

major

3'SS Sequence:

GTTGTGCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGACAAT

U12 Branch Point Sequence:

GGGGTGACAATC

Flanking Amino Acid:

LELFILRLAYRSRPEEGKLI

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

59.7

41.3

Major BPS

1.4

59.1

44.1

Major PPT

69.5

0.44

62.2

39.8

Minor 5ss

33.2

-1.9

3.1

42.7

44.4

Minor BPS

33.7

-1.2

2.1

36.2

34.4

Associated Gene:

Gene:

NR4A1

Ensembl Gene ID:

ENSAPLG00000029349

Chromosome:

PEDO01009325.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037480

59540 - 62977

3438