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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009337.1_1110_1371_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1110 - 1371

Intron Length:

262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

TTTTCCCTTGCA

Flanking Amino Acid:

QEDQGALAQEKEQVKALVSR

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

34.7

Major BPS

58.6

0.22

1.5

38.9

Major PPT

90.4

0.91

0.6

85.3

Minor 5ss

31.2

-2.2

3.2

38.8

46.5

Minor BPS

-0.5

3.7

76.43

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023388

Chromosome:

PEDO01009337.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035979

190 - 2492

2303