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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009365.1_269_552_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
269 - 552

Intron Length:
284

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTAGGTAGT

5'SS Class:
major

3'SS Sequence:
TTTGGCCCTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCCAAC

U12 Branch Point Sequence:
CTTCTTCCAACT

Flanking Amino Acid:
LITYKSTIGRDLIDDLKSEL

Intron Amino Acid Position:
40

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.7
0.65
1.1
72.7
44.5

Major BPS
61.9
0.3
1.2
70.7
33.5

Major PPT
72.7
0.51
0.9
63.3
39.5

Minor 5ss
35.6
-1.6
3.1
42.2
44.7

Minor BPS
48
-0
1.9
69.82
41.2

Associated Gene:

Gene:
ANXA4

Ensembl Gene ID:

Chromosome:
PEDO01009365.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

90 - 4411
4322