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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01009366.1_284_412_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

284 - 412

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCCAC

U12 Branch Point Sequence:

ACGCATTGAGCT

Flanking Amino Acid:

DVDKNIDINDVTPNCRVALR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

77.8

30.2

Major BPS

54.6

0.11

1.2

64.4

33.8

Major PPT

70.9

0.47

0.9

64.8

36.4

Minor 5ss

34.2

-1.8

3.4

41.4

Minor BPS

42.5

-0.4

1.7

53.7

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020340

Chromosome:

PEDO01009366.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040286

4 - 1351

1348